DNA Binding Site

Accessions: 6y42_F (3D-footprint 20231221)
Organisms: strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745, Streptomyces venezuelae
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 36
Sequence: CATTTGACTCGGACACAGACTATCCGAGTATTATCT
Binding TFs: 6y42_B (Transcriptional regulator, Winged helix-turn-helix transcription repressor, HrcA DNA-binding)
Binding Motifs: 6y42_AB ACTcGGATAnnnnnTGTCCGAG
6y42_B CTCGGACA
Publications: Crack JC, Amara P, Volbeda A, Mouesca JM, Rohac R, Pellicer Martinez MT, Huang CY, Gigarel O, Rinaldi C, Le Brun NE, Fontecilla-Camps JC. Electron and Proton Transfers Modulate DNA Binding by the Transcription Regulator RsrR. J Am Chem Soc 142:5104-5116 (2020). [Pubmed]

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