DNA Binding Site
| Accessions: | AAATATAT (UniPROBE 20160601) |
| Organisms: | Homo sapiens, Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | AAATATAT |
| Type: | Heterodimer |
| Binding TFs: | UP00337A (Transcription factor TFIID (or TATA-binding protein, TBP)) UP00029A (Transcription factor TFIID (or TATA-binding protein, TBP)) UP00595C (Homeobox domain) UP00595D (Homeobox domain) UP00599D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00604D (Homeobox domain) UP00604E (Homeobox domain) UP00626B (Homeobox domain) |
| Binding Motifs: | UP00029A_1 yywwwwTATAwwwmta UP00337A_1 vwhtaGrwATATATAtwsrwd UP00029A_2 ccswtwwaasskabc UP00595C_1 TwasksyATAATTAtwGgtwkdr UP00595D_1 dkwdwwATrTATAtATartrdv UP00599D_1 TamtwwTAATawATTAtbtwtm UP00604D_1 amaTtawatavrtatwywaTwa UP00604E_1 tawwywATrTwwATtAwytaAA UP00626B_1 ygwwwhwttTwATATagwaawaw |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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