DNA Binding Site
| Accessions: | GATGCATC (UniPROBE 20160601) |
| Organisms: | Saccharomyces cerevisiae, Acanthamoeba castellanii, Mus musculus, Strongylocentrotus purpuratus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GATGCATC |
| Type: | Heterodimer |
| Binding TFs: | UP00351A (KilA-N domain) UP00513A (Fork head domain) UP00528A (Fork head domain) UP00531A (Fork head domain) |
| Binding Motifs: | UP00351A_1 rrkkavCaTGCATmamgrwrg UP00513A_1 kyywwwkTGYTGCAAtctwrwc UP00513A_2 akkgyvkcCGCTGCAyhhytsk UP00528A_1 AwtkcawGATGCATCmTgmgwk UP00528A_2 wrarcaymAwAACAAmwmhhmm UP00531A_1 kmtcaamAATAACAAmwcrrcm UP00531A_2 wvmgmwsRTAAACAAtbyygtc |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.