DNA Binding Site

						

			
Accessions: CCCCCGCA (UniPROBE 20160601)

			
Organisms: Mus musculus, Saccharomyces cerevisiae, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: CCCCCGCA
Type: Heterodimer
Binding TFs: UP00400A (Zinc finger, C2H2 type, Domain of unknown function (DUF3432), Domain of unknown function (DUF3446), Zinc-finger double domain, C2H2-type zinc finger)
UP00291A (Zinc finger, C2H2 type, Zinc-finger double domain)
UP00007A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00276A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00289A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00293A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00317A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00349A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00587A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00587D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00627A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00627B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00627D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00627E (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Motifs: UP00007A_1 yCCGCCCMCgCayt
UP00276A_1 tkwaraCGTAAATCmtwwhh
UP00289A_1 ryrwryTACCCCGCAyhwrys
UP00291A_1 kwawdwAATGCGGGGkrmwwk
UP00293A_1 kgsastGCGGGGTAmtgyAa
UP00317A_1 acryrytACCCCGCAwwtwrk
UP00349A_1 wyrwryTACCCCGCAwTtwrk
UP00400A_1 sakmkgmCgCCCmCGCAytrtym
UP00007A_2 kkybGaGkGGGAywrk
UP00587A_1 aawmtCcGCCCCCGCaytmmtm
UP00587D_1 ktstwmyCCCMCGCAhtwtyaw
UP00627A_1 aatawwmCtCCCCCrCaytyvam
UP00627B_1 TwtTwawATAmAwATAAwwTwkG
UP00627D_1 kwtwywwCCCCCGCAyrwkyww
UP00627E_1 gassrATGCGkGGGAwrdkwwa
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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