DNA Binding Site

Accessions: 3uk3_A (3D-footprint 20231221), 3uk3_B (3D-footprint 20231221), 4is1_A (3D-footprint 20231221), 4is1_B (3D-footprint 20231221)
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 18
Sequence: TGCAGAATCGATTCTGCA
Type: Heterodimer
Binding TFs: 3uk3_C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
3uk3_D / 4is1_D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Motifs: 3uk3_C TTCTGCA
3uk3_CD TGCAGAATnnATTCTGCA
4is1_CD TGCAGAATnnATTCTGCA
4is1_D TGCAGAAT
Publications: Vandevenne M, Jacques D.A, Artuz C, Nguyen C.D, Kwan A.H, Segal D.J, Matthews J.M, Crossley M, Guss J.M, Mackay J.P. New insights into DNA recognition by zinc fingers revealed by structural analysis of the oncoprotein ZNF217. The Journal of biological chemistry 288:10616-27 (2013). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.