DNA Binding Site

Accessions: 1pdn_A (3D-footprint 20231221)
Organisms: Drosophila melanogaster
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 13
Sequence: CGTCACGGTTGAC
Binding TFs: 1pdn_C ('Paired box' domain, Homeodomain-like domain)
Binding Motifs: 1pdn_C CnTnACG
Publications: Xu W, Rould M.A, Jun S, Desplan C, Pabo C.O. Crystal structure of a paired domain-DNA complex at 2.5 A resolution reveals structural basis for Pax developmental mutations. Cell 80:639-50 (1995). [Pubmed]

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