DNA Binding Site

Accessions: veg (DBTBS 1.0)
Names: Site I, veg
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 62
Sequence: aaattttatTTGACAaaaatgggctcgtgttgTACAATaaatgtagtgaggtggatgcaa
tg
Binding TFs: SigA (Sigma-70 factor, region 1.2, Sigma-70 factor, region 1.1, Sigma-70 region 3, Sigma-70 region 2 , Sigma-70, region 4)
Binding Motifs: SigA_1 TTGACw
SigA_2 TAtAAT
Publications: Whipple F.W, Sonenshein A.L. Mechanism of initiation of transcription by Bacillus subtilis RNA polymerase at several promoters. Journal of molecular biology 223:399-414 (1992). [Pubmed]

Moran C.P, Lang N, LeGrice S.F, Lee G, Stephens M, Sonenshein A.L, Pero J, Losick R. Nucleotide sequences that signal the initiation of transcription and translation in Bacillus subtilis. Molecular & general genetics : MGG 186:339-46 (1982). [Pubmed]

Le Grice S.F, Sonenshein A.L. Interaction of Bacillus subtilis RNA polymerase with a chromosomal promoter. Journal of molecular biology 162:551-64 (1982). [Pubmed]

Fukushima T, Ishikawa S, Yamamoto H, Ogasawara N, Sekiguchi J. Transcriptional, functional and cytochemical analyses of the veg gene in Bacillus subtilis. Journal of biochemistry 133:475-83 (2003). [Pubmed]

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