DNA Binding Site
| Accessions: | MA1001.1.15 (JASPAR 2024), MA1005.1.13 (JASPAR 2024), MA1221.1.14 (JASPAR 2024), MA1225.1.20 (JASPAR 2024), MA1245.1.14 (JASPAR 2024), MA1247.1.10 (JASPAR 2024), MA1264.1.12 (JASPAR 2024) |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 23 |
| Sequence: | accgCCGCCGCCGCCGCCAccgt |
| Type: | Heterodimer |
| Binding TFs: | O80341 (AP2 domain) Q7G1L2 (AP2 domain) O80339 (AP2 domain) Q9C5I3 (AP2 domain) P93007 (AP2 domain) Q9FZ90 (AP2 domain) A0A178VAV2 (AP2 domain) A0A178VAV2 O80339 O80341 P93007 Q7G1L2 Q9C5I3 Q9FZ90 |
| Binding Motifs: | MA1001.1 scGCCGymaw MA1005.1 CGCCGcCr MA1221.1 tkrCGGCGGmGghgg MA1225.1 ccrcCgCCGCCGCCr MA1245.1 ccdcCkCCGCCGymr MA1247.1 ygrCGGCGGmGrhgg MA1264.1 ygryGGCGGCGGmGg |
| Publications: | Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.