DNA Binding Site
| Accessions: | CCGGATGC (UniPROBE 20160601) |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CCGGATGC |
| Type: | Heterodimer |
| Binding TFs: | UP00038A / UP00406A (Ets-domain) UP00411A (Ets-domain) UP00412A (Ets-domain) UP00414A (Ets-domain) UP00415A (Ets-domain) UP00416A (Ets-domain) UP00417A (Ets-domain) UP00421A (Ets-domain) UP00422A (Ets-domain) UP00423A (Ets-domain) UP00424A (Ets-domain) |
| Binding Motifs: | UP00038A_1 vyrcATCCGGaTwyty UP00406A_1 syrcwwCCGGwwyytb UP00411A_1 vtsmAyTTCCGGtwkc UP00412A_1 cdmaACwTCCGGtwyc UP00414A_1 crkkyACCGGAArtaaw UP00415A_1 vtgwryTTCCGGyarc UP00416A_1 mbsrAyTTCCGGtwky UP00417A_1 stsmAywTCCGGtggy UP00421A_1 mswbaCCGGAAGTrrma UP00422A_1 rygaAyTTCCGGtaky UP00423A_1 cdmaACWTCCGGtmvc UP00424A_1 rbsaAyTTCCGGTwrw UP00038A_2 rwbwAcATCCTAkwar |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.