DNA Binding Site

Accessions: 4xlp_P (3D-footprint 20231221)
Organisms: Thermus aquaticus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 25
Sequence: AGCACAATTTAACACTTTTGTCAAG
Binding TFs: 4xlp_F (Sigma-70 factor, region 1.2, Sigma-70 region 3, Sigma-70 region 2 , Sigma-70, region 4)
Binding Motifs: 4xlp_F CTTGAcannnnnnnnnnnnTnTGCT
Publications: Bae B, Feklistov A, Lass-Napiorkowska A, Landick R, Darst SA. Structure of a bacterial RNA polymerase holoenzyme open promoter complex. Elife : (2015). [Pubmed]

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