DNA Binding Site
| Accessions: | ACCGGAAC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ACCGGAAC |
| Type: | Heterodimer |
| Binding TFs: | UP00331A (Fungal Zn(2)-Cys(6) binuclear cluster domain, PAS fold) UP00038A / UP00406A (Ets-domain) UP00277A (Fungal Zn(2)-Cys(6) binuclear cluster domain) UP00410A (Ets-domain) UP00412A (Ets-domain) UP00415A (Ets-domain) UP00420A (Ets-domain) UP00421A (Ets-domain) UP00423A (Ets-domain) |
| Binding Motifs: | UP00038A_1 vyrcATCCGGaTwyty UP00277A_1 tcmawwACCGGcGwawkctar UP00331A_1 mrmwwdTTCCGGAACawmhr UP00406A_1 syrcwwCCGGwwyytb UP00410A_1 mswtACCGGAAGYdsmr UP00412A_1 cdmaACwTCCGGtwyc UP00415A_1 vtgwryTTCCGGyarc UP00420A_1 ackyACCGGAAGydmms UP00421A_1 mswbaCCGGAAGTrrma UP00423A_1 cdmaACWTCCGGtmvc UP00038A_2 rwbwAcATCCTAkwar |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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