DNA Binding Site
| Accessions: | CATACATG (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CATACATG |
| Type: | Heterodimer |
| Binding TFs: | UP00236A (Homeobox domain, Homeobox KN domain) UP00584B (Homeobox domain) UP00584D (Homeobox domain) UP00599D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Motifs: | UP00236A_1 wwdrTACATGTAarwkw UP00584B_1 wcywgmvaysayATGTactarms UP00584D_2 smysmwatrtryayatrkAwkwd UP00599D_2 wkhwasaCACATwaCAkwaakyk |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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