DNA Binding Site

Accessions: AACAAACA (UniPROBE 20160601)
Organisms: Mus musculus, Allomyces macrogynus, Emericella nidulans, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: AACAAACA
Type: Heterodimer
Binding TFs: UP00041A (Fork head domain)
UP00515A (Fork head domain)
UP00518A (Fork head domain)
UP00523A (Fork head domain)
Binding Motifs: UP00041A_1 awwrTAAACAaAmdkk
UP00041A_2 ayrtcAyAACAacac
UP00515A_1 wmrbtrtGatTGTTTAtcwtwhm
UP00515A_2 symmsagmmhAyAACAwwkggyk
UP00518A_1 cmcmhwrtrrCAAACAwhykhay
UP00518A_2 grsmyawGTTTTACAcgwkmgw
UP00523A_1 scctcdmrCAAACAahyawkrk
UP00523A_2 cmymvykArGACGCCAavwgasg
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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