DNA Binding Site

						

			
Accessions: GATATCCC (UniPROBE 20160601)

			
Organisms: Mus musculus, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: GATATCCC
Type: Heterodimer
Binding TFs: UP00008A / UP00388A (Homeobox domain, Homeobox KN domain)
UP00159A (Homeobox domain, Homeobox KN domain)
UP00192A (Homeobox domain, Homeobox KN domain)
UP00195A (Homeobox domain, Homeobox KN domain)
UP00620A (Homeobox domain, Homeobox KN domain)
UP00629A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
UP00629C (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Binding Motifs: UP00008A_1 rwwrGGGTATCAhwtwt
UP00159A_1 rakrGGGTATCAcdwyt
UP00192A_1 ratrGGGTATCAykwbt
UP00195A_1 rAtrGGGTATCAywwwt
UP00388A_1 datrGGGTATCAhwwwt
UP00008A_2 mwbskATATATmcryyt
UP00388A_2 rwwrGGGTATCAwtwyt
UP00620A_1 mwkrakGTATCAwtkayycGrg
UP00629A_1 sswkkwaadGGAKACmmwswsrw
UP00629C_1 sswktmarrGGAKACmhdgksra
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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