DNA Binding Site

Accessions: 4fth_C (3D-footprint 20231221)
Organisms: Aquifex aeolicus, strain VF5
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 20
Sequence: TTGCAAATTTGCAAATGCAT
Type: Heterodimer
Binding TFs: 4fth_A (Bacterial regulatory protein, Fis family)
4fth_B (Bacterial regulatory protein, Fis family)
Binding Motifs: 4fth_A TGCAAA
4fth_AB TTGCAnnnnTGCAAA
Publications: Vidangos N.K, Heideker J, Lyubimov A, Lamers M, Huo Y, Pelton J.G, Ton J, Gralla J, Berger J, Wemmer D.E. DNA recognition by a σ(54) transcriptional activator from Aquifex aeolicus. Journal of molecular biology 426:3553-68 (2014). [Pubmed]

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