DNA Binding Site
| Accessions: | 1gat_C (3D-footprint 20231221), 1gau_C (3D-footprint 20231221), MA1970.2.12 (JASPAR 2024) |
| Organisms: | Gallus gallus, Homo sapiens |
| Libraries: | 3D-footprint 20231221 1, JASPAR 2024 2 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | GTTTATCT |
| Type: | Heterodimer |
| Binding TFs: | 1gat_A / 1gau_A (GATA zinc finger) Q9UHF7 (GATA zinc finger) Q9UHF7 |
| Binding Motifs: | 1gat_A AGATA 1gau_A aGATa MA1970.2 TCTTATCT |
| Publications: | Omichinski J. G., Clore G. M., Schaad O., Felsenfeld G., Trainor C., Appella E., Stahl S. J., Gronenborn A. M. NMR structure of a specific DNA complex of Zn-containing DNA binding domain of GATA-1.. Science 261:438-446 (1993). [Pubmed] Serandour AA, Mohammed H, Miremadi A, Mulder KW, Carroll JS. TRPS1 regulates oestrogen receptor binding and histone acetylation at enhancers. Oncogene 37:5281-5291 (2018). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.