DNA Binding Site

						

			
Accessions: AATCCCGA (UniPROBE 20160601), MA0056.3.13 (JASPAR 2024)

			
Organisms: Saccharomyces cerevisiae, Homo sapiens
Libraries: UniPROBE 20160601 1, JASPAR 2024 2
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 8
Sequence: AATCCCGA
Type: Heterodimer
Binding TFs: UP00335A (Fungal Zn(2)-Cys(6) binuclear cluster domain, Fungal specific transcription factor domain )
UP00302A
P28698 (Zinc finger, C2H2 type, SCAN domain, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
P28698
Binding Motifs: UP00302A_1 rkdkhgaAAwyCCGAgrrmkt
UP00335A_1 atyvmkaTCCCGGgawkkbt
MA0056.3 AATCCCCA
			
Publications: *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed]


Morris J. F., Hromas R., Rauscher III F. J. Characterization of the DNA-binding properties of the myeloid zinc finger protein MZF1: two independent DNA-binding domains recognize two DNA consensus sequences with a common G-rich core. Mol. Cell. Biol. 14:1786-1795 (1994). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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