DNA Binding Site

Accessions: 4i2o_X (3D-footprint 20231221)
Organisms: Bradyrhizobium japonicum
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 24
Sequence: CTATCTTGATTTCAATCAATTCCC
Binding TFs: 4i2o_B (Cyclic nucleotide-binding domain, Bacterial regulatory proteins, crp family, Crp-like helix-turn-helix domain)
Binding Motifs: 4i2o_B TCAa
4i2o_AB tGAnnnnnnTCa
Publications: Bonnet M, Kurz M, Mesa S, Briand C, Hennecke H, Grütter M.G. The structure of Bradyrhizobium japonicum transcription factor FixK2 unveils sites of DNA binding and oxidation. The Journal of biological chemistry 288:14238-46 (2013). [Pubmed]

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