DNA Binding Site
| Accessions: | CACCGACA (UniPROBE 20160601), MA1233.3.13 (JASPAR 2024), MA1233.3.15 (JASPAR 2024), MA1233.3.3 (JASPAR 2024), MA1238.3.1 (JASPAR 2024), MA1238.3.19 (JASPAR 2024), MA1238.3.2 (JASPAR 2024), MA1238.3.6 (JASPAR 2024), MA1265.3.1 (JASPAR 2024), MA1265.3.15 (JASPAR 2024), MA1265.3.16 (JASPAR 2024), MA1265.3.17 (JASPAR 2024), MA1265.3.18 (JASPAR 2024), MA1265.3.2 (JASPAR 2024), MA1679.2.1 (JASPAR 2024), MA1679.2.12 (JASPAR 2024), MA1679.2.13 (JASPAR 2024), MA1679.2.14 (JASPAR 2024), MA1679.2.15 (JASPAR 2024), MA1679.2.16 (JASPAR 2024), MA1679.2.17 (JASPAR 2024), MA1679.2.4 (JASPAR 2024), MA2011.2.1 (JASPAR 2024), MA2011.2.16 (JASPAR 2024), MA2011.2.17 (JASPAR 2024), MA2011.2.18 (JASPAR 2024), MA2011.2.6 (JASPAR 2024), MA2414.1.7 (JASPAR 2024) |
| Organisms: | Arabidopsis lyrata, Arabidopsis thaliana, Zea mays |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | CACCGACA |
| Type: | Heterodimer |
| Binding TFs: | Q8LC30 (AP2 domain) Q9ZQP3 (AP2 domain) UP00557A (AP2 domain) Q9C9I2 (AP2 domain) Q6NLD5 (AP2 domain) Q9FH94 (AP2 domain) K7UY40 Q6NLD5 Q8LC30 Q9C9I2 Q9FH94 Q9ZQP3 |
| Binding Motifs: | UP00557A_1 kkkrvtsATGTCGrCraggrth UP00557A_2 gkbrmwrATGTCGRCvmkgaty UP00557A_3 tsdrgysATGTCGrCrasgkmr UP00557A_4 kkkgsysATGTCGrYrakrwtm UP00557A_5 dkykcwrATGTCGrYrrkrmth UP00557A_6 tskrgysATGTCGrCrasgkwr MA1233.3 CrCCGACA MA1238.3 CACCGACA MA1265.3 CACCGACA MA1679.2 CACCGACA MA2011.2 CACCGACA MA2414.1 TRCCGACA |
| Publications: | Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). [Pubmed] Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). [Pubmed] Dong CJ, Liu JY. The Arabidopsis EAR-motif-containing protein RAP2. 1 functions as an active transcriptional repressor to keep stress responses under tight control : (BMC). [Pubmed] |
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