DNA Binding Site
| Accessions: | 4xic_B (3D-footprint 20231221), 5jlw_E (3D-footprint 20231221), 5jlx_B (3D-footprint 20231221) |
| Organisms: | Drosophila melanogaster |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Length: | 14 |
| Sequence: | AGAAAGCATTAGAG |
| Type: | Heterodimer |
| Binding TFs: | 4xic_A (Homeobox domain) 5jlw_D / 5jlx_A (Homeobox domain) |
| Binding Motifs: | 4xic_A CTAAtg 5jlw_D CATTAG 5jlx_A GCATTAG |
| Publications: | Zandarashvili L, Nguyen D, Anderson KM, White MA, Gorenstein DG, Iwahara J. Entropic Enhancement of Protein-DNA Affinity by Oxygen-to-Sulfur Substitution in DNA Phosphate. Biophys J 109:1026-37 (2015). [Pubmed] Nguyen D, Zandarashvili L, White MA, Iwahara J. Stereospecific Effects of Oxygen-to-Sulfur Substitution in DNA Phosphate on Ion Pair Dynamics and Protein-DNA Affinity. Chembiochem 17:1636-42 (2016). [Pubmed] |
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