DNA Binding Site
| Accessions: | GGCAATTA (UniPROBE 20160601) |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GGCAATTA |
| Type: | Heterodimer |
| Binding TFs: | UP00263A (Homeobox domain) UP00104A (Homeobox domain) UP00145A (Homeobox domain) UP00151A (Homeobox domain) UP00155A (Homeobox domain) UP00166A (Homeobox domain) UP00168A (Homeobox domain) UP00181A (Homeobox domain) UP00157A (Homeobox domain) |
| Binding Motifs: | UP00104A_1 msvAGCAATTAAwgvwt UP00145A_1 aamAAcCAATTAAswh UP00151A_1 taakYAATTRrtkrtr UP00155A_1 acaAgCAATTAAwgvrT UP00157A_1 asaAgCAATTAAwrrat UP00166A_1 aamAAcCAATTArkwc UP00168A_1 taadTAATTAATrgctw UP00181A_1 marsyAATTrsygaaw UP00263A_1 wsykGyAATTAAtarw |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.