DNA Binding Site

						

			
Accessions: AACAATAA (UniPROBE 20160601)

			
Organisms: Mus musculus, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: AACAATAA
Type: Heterodimer
Binding TFs: UP00014A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00016A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00030A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00062A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00064A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00069A (HMG (high mobility group) box, Domain of unknown function (DUF1898), SOX transcription factor)
UP00071A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00075A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00091A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00096A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00101A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00034A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
UP00589C (Fork head domain)
Binding Motifs: UP00069A_7 khtaATTATAATwwdm
UP00014A_1 / UP00069A_11 mwaAACAATTrAwhw
UP00016A_1 khkwATTATAATrwtm
UP00030A_1 / UP00069A_1 wkwarAACAAWGraywa
UP00034A_1 mwtrwwrAACAATarawythyw
UP00062A_1 akdarAACAAAGracww
UP00064A_1 / UP00069A_13 twyhATTGTTbtmamw
UP00069A_15 wwtyaATTcAwTamdk
UP00071A_1 hwtwATTATAATwdwk
UP00069A_9 / UP00075A_1 wrkwgAACAATwrrtwt
UP00091A_1 wwdrgAACAATwaahw
UP00069A_5 / UP00096A_1 wtwrgAACAATwwwtw
UP00069A_3 / UP00101A_1 twATTGTTcthawh
UP00069A_8 ykyasACAATrgmks
UP00014A_2 / UP00069A_12 gwycacATTCAtryrat
UP00016A_2 yydmdraACAATrrryg
UP00030A_2 / UP00069A_2 arAATTGTywkrrw
UP00034A_2 gtsswaATTrwstgwgkrcksy
UP00062A_2 grwarAATTGTtasrra
UP00064A_2 / UP00069A_14 gkrsyraATtyrwdhm
UP00069A_10 / UP00075A_2 btramTGwmATtysr
UP00069A_16 myaTaATTGTTakys
UP00069A_4 / UP00101A_2 mmwyasACAAAGrawt
UP00069A_6 / UP00096A_2 rtrytGGgtGGGwawwt
UP00071A_2 vvycwATTGTtcckhkr
UP00091A_2 wwtCatmAttwasdd
UP00589C_1 gwabcwwAartAAACAhwaykw
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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