DNA Binding Site
| Accessions: | AACAATGG (UniPROBE 20160601), MA0087.3.13 (JASPAR 2024), MA0087.3.9 (JASPAR 2024) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | AACAATGG |
| Type: | Heterodimer |
| Binding TFs: | UP00004A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00014A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00016A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00023A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00062A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00091A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00401A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) P35710 (HMG (high mobility group) box, Domain of unknown function (DUF1898)) P35710 |
| Binding Motifs: | UP00004A_1 khtaATTATAATwwdm UP00014A_1 mwaAACAATTrAwhw UP00016A_1 khkwATTATAATrwtm UP00023A_1 rwdgAACAATkraayt UP00062A_1 akdarAACAAAGracww UP00091A_1 wwdrgAACAATwaahw UP00401A_1 tadAACAAwGrvrw UP00004A_2 ykyasACAATrgmks UP00014A_2 gwycacATTCAtryrat UP00016A_2 yydmdraACAATrrryg UP00023A_2 tmwgATTATAATmcgs UP00062A_2 grwarAATTGTtasrra UP00091A_2 wwtCatmAttwasdd MA0087.3 AACAATGG |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] Denny P., Swift S., Connor F., Ashworth A. An SRY-related gene expressed during spermatogenesis in the mouse encodes a sequence-specific DNA-binding protein. EMBO J. 11:3705-3712 (1992). [Pubmed] |
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