DNA Binding Site
| Accessions: | AAAAAAAC (UniPROBE 20160601), MA1125.2.17 (JASPAR 2024), MA1125.2.20 (JASPAR 2024) |
| Organisms: | Saccharomyces cerevisiae, Caenorhabditis elegans, Homo sapiens |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | AAAAAAAC |
| Type: | Heterodimer |
| Binding TFs: | UP00342A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00370A (Helix-loop-helix DNA-binding domain) Q8TF68 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) Q8TF68 |
| Binding Motifs: | UP00342A_1 wywrdrAAAAwTTTTyywykg UP00370A_1 tawgrCACGTGTchwaw MA1125.2 AAAAAAaa |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] Thunyakitpisal P., Alvarez M., Tokunaga K., Onyia J. E., Hock J., Ohashi N., Feister H., Rhodes S. J., Bidwell J. P. Cloning and functional analysis of a family of nuclear matrix transcription factors (NP/NMP4) that regulate type I collagen expression in osteoblasts.. J. Bone Miner. Res. 16:10-23 (2001). [Pubmed] |
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