DNA Binding Site

Accessions: 4rb1_D (3D-footprint 20231221)
Organisms: Magnetospirillum gryphiswaldense, strain DSM 6361 / JCM 21280 / NBRC 15271 / MSR-1
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 24
Sequence: CGCGATAATGATAATCATTATCCG
Binding TFs: 4rb1_B (Ferric uptake regulator family)
Binding Motifs: 4rb1_AB CGATnnnnnTnnTnnnnnT
4rb1_B cGAt
Publications: Deng Z, Wang Q, Liu Z, Zhang M, Machado AC, Chiu TP, Feng C, Zhang Q, Yu L, Qi L, Zheng J, Wang X, Huo X, Qi X, Li X, Wu W, Rohs R, Li Y, Chen Z. Mechanistic insights into metal ion activation and operator recognition by the ferric uptake regulator. Nat Commun : (2015). [Pubmed]

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