DNA Binding Site

Accessions: 4kfc_Z (3D-footprint 20231221)
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 30
Sequence: CGGGCGGGGTGTAAAAAAAGTATAAAAATG
Binding TFs: 4kfc_B (Response regulator receiver domain, Transcriptional regulatory protein, C terminal)
Binding Motifs: 4kfc_AB TGTAAaannnnTnnaAAA
4kfc_B TGTAA
Publications: Narayanan A, Kumar S, Evrard A.N, Paul L.N, Yernool D.A. An asymmetric heterodomain interface stabilizes a response regulator-DNA complex. Nature communications 5:3282 (2014). [Pubmed]

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