DNA Binding Site
| Accessions: | MA0500.3.10 (JASPAR 2024), MA0500.3.14 (JASPAR 2024), MA0500.3.15 (JASPAR 2024), MA1619.2.1 (JASPAR 2024), MA2295.1.13 (JASPAR 2024), UN0733.1.15 (JASPAR 2024), UN0808.1.1 (JASPAR 2024), UN0808.1.7 (JASPAR 2024) |
| Organisms: | Homo sapiens, Mus musculus, Drosophila melanogaster, Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | GCAGCTGG |
| Type: | Heterodimer |
| Binding TFs: | P17542 (Helix-loop-helix DNA-binding domain) P15173 (Helix-loop-helix DNA-binding domain, Myogenic Basic domain) Q9QX98 (Helix-loop-helix DNA-binding domain) P10083 P15173 P17542 Q11094 Q9QX98 |
| Binding Motifs: | MA0500.3 rCAGCTGy MA1619.2 aCAGCTGt MA2295.1 gCAGCTGc UN0733.1 cCAGmTGg UN0808.1 GCACCTGg |
| Publications: | Cao Y, Kumar R.M, Penn B.H, Berkes C.A, Kooperberg C, Boyer L.A, Young R.A, Tapscott S.J. Global and gene-specific analyses show distinct roles for Myod and Myog at a common set of promoters. The EMBO journal 25:502-11 (2006). [Pubmed] Meredith DM, Borromeo MD, Deering TG, Casey BH, Savage TK, Mayer PR, Hoang C, Tung KC, Kumar M, Shen C, Swift GH, Macdonald RJ, Johnson JE. Program specificity for Ptf1a in pancreas versus neural tube development correlates with distinct collaborating cofactors and chromatin accessibility. Mol Cell Biol 33:3166-79 (2013). [Pubmed] Nitta KR, Jolma A, Yin Y, Morgunova E, Kivioja T, Akhtar J, Hens K, Toivonen J, Deplancke B, Furlong EE, Taipale J. Conservation of transcription factor binding specificities across 600 million years of bilateria evolution. Elife : (2015). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.