DNA Binding Site

Accessions: en_39-2-B (DrosophilaTF 1.1), ACTAATTA (UniPROBE 20160601)
Organisms: Drosophila melanogaster, Mus musculus, Saccharomyces cerevisiae, Homo sapiens
Libraries: DrosophilaTF 1.1 1, UniPROBE 20160601 2
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
2 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: ACTAATTA
Type: Heterodimer
Binding TFs: UP00224A (Homeobox domain, 'Paired box' domain)
UP00127A (Homeobox domain)
en (Homeobox domain, Engrailed homeobox C-terminal signature domain)
UP00063A / UP00391A (Homeobox domain)
UP00105A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00106A (Homeobox domain)
UP00108A (Homeobox domain)
UP00110A (Homeobox domain)
UP00113A (Homeobox domain)
UP00115A (Homeobox domain, Homeobox KN domain)
UP00116A (Homeobox domain)
UP00120A (Homeobox domain)
UP00123A (Homeobox domain)
UP00124A (Homeobox domain)
UP00126A (Homeobox domain)
UP00128A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00129A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00130A (Homeobox domain, Homeobox KN domain)
UP00131A (Homeobox domain)
UP00132A (Homeobox domain)
UP00136A (Homeobox domain, Homeobox KN domain)
UP00137A (Homeobox domain)
UP00138A (Homeobox domain)
UP00139A (Homeobox domain)
UP00141A (Homeobox domain)
UP00142A (Homeobox domain)
UP00144A (Homeobox domain)
UP00145A (Homeobox domain)
UP00149A (Homeobox domain)
UP00151A (Homeobox domain)
UP00152A (Homeobox domain)
UP00154A (Homeobox domain)
UP00156A (Homeobox domain)
UP00158A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00162A (Homeobox domain)
UP00163A (Homeobox domain, Engrailed homeobox C-terminal signature domain)
UP00167A (Homeobox domain, Engrailed homeobox C-terminal signature domain)
UP00168A (Homeobox domain)
UP00169A (Homeobox domain, Homeobox KN domain)
UP00170A (Homeobox domain, Homeobox KN domain)
UP00171A (Homeobox domain)
UP00172A (Homeobox domain, Homeobox KN domain)
UP00174A (Homeobox domain)
UP00175A (Homeobox domain, Homeobox KN domain)
UP00178A (Homeobox domain)
UP00179A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00181A (Homeobox domain)
UP00182A (Homeobox domain)
UP00184A (Homeobox domain, Homeobox KN domain)
UP00187A (Homeobox domain)
UP00188A (Homeobox domain, Homeobox KN domain)
UP00189A (Homeobox domain)
UP00191A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00196A (Homeobox domain)
UP00201A (Homeobox domain)
UP00202A (Homeobox domain)
UP00204A (Homeobox domain)
UP00206A (Homeobox domain)
UP00212A (Homeobox domain, Homeobox KN domain)
UP00214A (Homeobox domain)
UP00215A (Homeobox domain)
UP00218A (Homeobox domain)
UP00220A (Homeobox domain)
UP00221A (Homeobox domain)
UP00225A (Homeobox domain)
UP00230A (Homeobox domain)
UP00233A (Homeobox domain)
UP00237A (Homeobox domain)
UP00241A (Homeobox domain)
UP00242A (Homeobox domain)
UP00243A (Homeobox domain)
UP00247A (Homeobox domain, 'Paired box' domain)
UP00248A (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
UP00251A (Homeobox domain)
UP00252A (Homeobox domain)
UP00253A (Homeobox domain)
UP00254A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00255A (Homeobox domain)
UP00257A (Homeobox domain)
UP00259A (Homeobox domain)
UP00260A (Homeobox domain)
UP00261A (Homeobox domain, Homeobox KN domain)
UP00262A (Homeobox domain, Homeobox KN domain)
UP00266A (Homeobox domain)
UP00274A (Homeobox domain)
UP00146A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00209A (Homeobox domain, Homeobox KN domain)
UP00256A (Homeobox domain, Homeobox KN domain)
UP00399A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00505A (Homeobox domain)
UP00506A (Homeobox domain)
UP00507A (Homeobox domain)
UP00510A (Homeobox domain)
UP00512A (Homeobox domain)
UP00584A (Homeobox domain)
UP00584B (Homeobox domain)
UP00584C (Homeobox domain)
UP00584D (Homeobox domain)
UP00584F (Homeobox domain)
UP00585B (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
UP00588A (Homeobox domain)
UP00588B (Homeobox domain, Homeobox KN domain)
UP00594A (Homeobox domain)
UP00594B (Homeobox domain)
UP00594C (Homeobox domain)
UP00595B (Homeobox domain)
UP00596A (Homeobox domain)
UP00596B (Homeobox domain)
UP00596C (Homeobox domain)
UP00598A (Homeobox domain)
UP00598B (Homeobox domain)
UP00603A (Homeobox domain)
UP00603B (Homeobox domain)
UP00603C (Homeobox domain)
UP00609C (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
UP00609D (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
UP00609E (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
UP00609H (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
UP00610A (Homeobox domain, 'Paired box' domain)
UP00610B (Homeobox domain, 'Paired box' domain)
UP00610C (Homeobox domain, 'Paired box' domain)
UP00610D (Homeobox domain, 'Paired box' domain)
UP00611A (Homeobox domain, 'Paired box' domain)
UP00611D (Homeobox domain, 'Paired box' domain)
UP00611G (Homeobox domain, 'Paired box' domain)
UP00613B (Homeobox domain, Homeobox KN domain)
UP00614A (Homeobox domain)
UP00614B (Homeobox domain)
UP00615D (Homeobox domain)
UP00616B (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00616C (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00616E (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00618A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00618B (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00618C (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00619A (Homeobox domain, Homeobox KN domain)
UP00619B (Homeobox domain, Homeobox KN domain)
UP00619C (Homeobox domain, Homeobox KN domain)
UP00623A (Homeobox domain)
UP00623B (Homeobox domain)
UP00624A (Homeobox domain)
UP00624B (Homeobox domain)
UP00625A (Homeobox domain)
UP00625B (Homeobox domain)
UP00625C (Homeobox domain)
UP00625D (Homeobox domain)
UP00626A (Homeobox domain)
UP00626C (Homeobox domain)
Binding Motifs: UP00259A_1 wwtksgTAATTACsdy
UP00255A_1 twrttaATTAwtaawwr
UP00063A_1 tkgagbTAATTAry
UP00105A_1 rmttAATTAATTAadtc
UP00106A_1 kwvcryTAATTArkrc
UP00108A_1 wawayTAATTAryTsav
UP00110A_1 bcrcdaTAATTAcmswc
UP00113A_1 CgmrTTAATTAAywawm
UP00115A_1 waaayTAATTArykmhs
UP00116A_1 wrcmyTAATTArtkswy
UP00120A_1 tgmayYAATTRryksrr
UP00123A_1 kkmsTAATTAGkgshv
UP00124A_1 marsTAATTAgywcAt
UP00126A_1 vrdrYAATTRbhymag
UP00127A_1 asryTAATTAgyysAk
UP00128A_1 swtAaTTAATTArkkyr
UP00129A_1 rmyTAATTAATTAaktm
UP00130A_1 sdaaTTAATTAAwwmmk
UP00131A_1 dscrCTAATTAGysrkt
UP00132A_1 ymcmGCTAATTAGckkw
UP00136A_1 wvmrYTAATTARygrwr
UP00137A_1 wravcTMATKAgykrrw
UP00138A_1 vmrgyAATTrsytsAd
UP00139A_1 dtbcryYAATTRrtrcw
UP00141A_1 csaryTAATTAryratt
UP00142A_1 vataaTTAATTAAygsg
UP00144A_1 cgmrTTAATTAAtwahy
UP00145A_1 aamAAcCAATTAAswh
UP00146A_1 vwmswTAATKAGstkgm
UP00149A_1 vrkaaTTAATTAAyrsg
UP00151A_1 taakYAATTRrtkrtr
UP00152A_1 gtscryTAATTArtksw
UP00154A_1 kmrmdaTAATTAcmswm
UP00156A_1 vmagACyAATTAgykht
UP00158A_1 rrwtAATTAATTAwgtc
UP00162A_1 wvarcTAATTAgygswc
UP00163A_1 wgmmyYAATTRrygrah
UP00167A_1 gsvAAcTAATTArkgc
UP00168A_1 taadTAATTAATrgctw
UP00169A_1 rrwwwTTAATTAAtwyb
UP00170A_1 mhmaAyymMTTAakwy
UP00171A_1 mamAAcyAATTAAktw
UP00172A_1 cgmrTTAATTAAkwdac
UP00174A_1 amggTAATTAscymAd
UP00175A_1 csyayTAATTArtymcy
UP00178A_1 cgsryyAATTrrkways
UP00179A_1 ttkTATGCWAATkara
UP00181A_1 marsyAATTrsygaaw
UP00182A_1 amgkTAATTACcymak
UP00184A_1 wmmvCTAATTAGCkgtg
UP00187A_1 cgcryTAATTArthasc
UP00188A_1 sgawTTAATTAAwwwyy
UP00189A_1 amgkTAATTAscwmar
UP00191A_1 ywkTATGCWAATkara
UP00196A_1 grttrtTAATTAackbg
UP00201A_1 wvmrCTAATTAGykshy
UP00202A_1 btgarrTAATTAay
UP00204A_1 wdsmaCYAATTRGtgbw
UP00206A_1 stakTAATTAmtkshr
UP00209A_1 cgmryTAATTArtymcy
UP00212A_1 sraaTTAATTAAwwamy
UP00214A_1 amgkTAATTAschmat
UP00215A_1 asgtTAATTAvcyyag
UP00218A_1 bktmAtTAATkAakwm
UP00220A_1 wgmrcyAATTrgyGsgr
UP00221A_1 yrkmAyTAATTAryrv
UP00224A_1 TrayTAATTArtkvac
UP00225A_1 cmaTAATTrATTAym
UP00230A_1 ssrgyAATTrsykmts
UP00233A_1 rvkgTAATTAsmycAg
UP00237A_1 cryarTTAATTAAykkg
UP00241A_1 ytgrgkTAATTAmcst
UP00242A_1 twkrrgTAATTAhykt
UP00243A_1 hmyvCyAATTrGkbgw
UP00247A_1 wsawyTAATTAryysdm
UP00248A_1 mgwmyTAATTArkwmda
UP00251A_1 wwycryTAATTArtksw
UP00252A_1 cgmrtTAATTAatwayt
UP00253A_1 wscayYAATTRryssmy
UP00254A_1 dtdwrwTAATTArktw
UP00256A_1 swrcryTAATTArkkyw
UP00257A_1 ckmsyTAATTArtyrds
UP00260A_1 yrarkTAATTAmtwamw
UP00261A_1 kaaaCTAATTAGstwtg
UP00262A_1 mgwaTTAATTAAwwahk
UP00266A_1 vkaayTAATTAryTast
UP00274A_1 ttsmmaYTAATTARwwwmks
UP00391A_1 tygmrbTAATTAry
UP00399A_1 ywwradwTwTGCAwAwtsarwm
en TAATTa
UP00063A_2 aarawCbATTArsr
UP00146A_2 rhasATAATGAGstkkc
UP00209A_2 crmrTTAATTAAttgrm
UP00256A_2 wmcrCTAATTAGcggwk
UP00505A_1 mmtwvasCTAATTAGygrdrct
UP00506A_1 amkwgvryyAATTrrcksacyw
UP00507A_1 tarcrsCrCyAATTAgygywyy
UP00510A_1 myacTgrrcTAATTAscsbrdr
UP00512A_1 aawraarGGTAATTAmydkwkw
UP00584A_1 trhatvsyTAATTArktwtmtt
UP00584A_2 aAgdwcgCyAATTrGckmbtgm
UP00584B_2 wtwhtddkmTAATTAvmshwkrw
UP00584C_1 aakwkcgCTAATTAGybsrygy
UP00584C_2 kavwsrsCyAATTrGyysmrka
UP00584D_1 Trrkdgbayaattrtwrmtwdw
UP00584F_1 amgatrayTAATTArygsbgcm
UP00584F_2 mAkrdyrCyAATTrGckrwtgm
UP00585B_1 wywmtskkyTAATTAhmmkrkda
UP00588A_1 mahrgcGCTAATTAGygcswGm
UP00588B_1 tcakvkGyTAATTAgChaAdwma
UP00594A_1 gkscscryTAATTArymmgcgg
UP00594A_2 ryrtkwrCyAATTrGtbgwmgw
UP00594B_1 rcrwrdsCYAATTRGtkgwwsw
UP00594C_1 kkycscryTAATTArtmakcsg
UP00594C_2 wmakhtgcyAATTrrcmwrwwhw
UP00595B_1 wamktwTAATywATTAtartttt
UP00596A_1 rAawwaATAATmATTAkycwwwr
UP00596A_2 kkmbtrstTAATTAakwrtmds
UP00596B_1 kkmcgcgTTAATTAAkmmtcgr
UP00596B_2 twmmwasyTAATTArtwawadk
UP00596C_1 kkcsrmgtTAATTAakmatcgg
UP00596C_2 wtmtawGkTAATTAhChhAdwaa
UP00598A_1 mctwkrsCTAATTAGagcmssg
UP00598B_1 ykyrscmYTAATTAAkmwsckg
UP00598B_2 gkcmscryTAATTArkvhkssb
UP00603A_1 mtwyaaaAAcCAATTAacwmray
UP00603A_2 bwyraaaacYAATTAaywhwmby
UP00603B_1 wtwtrtgyAATTAwttaaktysw
UP00603B_2 ssgksgcAkYAATTAskmmymya
UP00603C_1 awwsydrACYAATTAdsgcmdy
UP00603C_2 ydmmayrCyAATTrGtmwtyrs
UP00609C_1 krwmktTAATCGATTActrgmd
UP00609D_1 katckwTAATCGATTAmyrsak
UP00609E_1 kawmktTAATCGATTActrgad
UP00609H_1 kawmktTAATCGATTAcyksad
UP00610A_1 kywsrksskCTAATTArkgcwmT
UP00610A_2 aAkwrccyTAATTArmhsmhbw
UP00610A_3 wwkrmycaATTAATtwgkkcdc
UP00610B_1 twwwkcbkttTAATTAasmasgk
UP00610C_1 aakwsswyTAATTArygsacbw
UP00610C_2 aakwgswyTAATTArygsacbw
UP00610D_1 varwsgcytAATTarkccmwwk
UP00610D_2 aakwgshyTAATTArygsackw
UP00611A_1 rcrkmwswrTGCAyasrwcmAtr
UP00611A_2 tymwakgkTAATTArcatdwwmw
UP00611D_1 whwydkgkTAATTAkcawawwaw
UP00611G_1 taTkkatgtgTGCAcacdkmygh
UP00613B_1 aakrbywcTAATTAgwrcymsh
UP00613B_2 ykwmrwctTAATTAaratysrr
UP00614A_1 tkcrwkrstrATyagyaaawwaa
UP00614B_1 wsvgakssTAATTAgsmawwwmw
UP00615D_1 twyktwwmsTAATTAykmmcawa
UP00616B_1 hkwrythATTATGCRgayakhm
UP00616C_1 kgacgyyyTAATTArwcrtcrr
UP00616E_1 kgmcgyyyTAATTArwcakcrg
UP00618A_1 wwvrybagcTAATTArkgywmt
UP00618B_1 wyhcgrgcTAATTAkcycarwaw
UP00618C_1 twwmrybagcTAATTArbrywmt
UP00619A_1 wAytkTAATywAATTAkyTdag
UP00619B_1 rwrtdTwwtyyAATTArkwywaw
UP00619C_1 AwgtwTAATyTAATTAwtwkwg
UP00623A_1 tyatcggsTAATTAscycAktmr
UP00623A_2 wtakcggsYAATTRscymAdwar
UP00623B_1 whmtrkGsTAATTAsCccAtwaa
UP00623B_2 whatskGyTAATTAsCycAdtar
UP00624A_1 wwmdwkgbTAATTAkcmawwawa
UP00624B_1 trvgwbgsTaATtAgcmwawwmw
UP00625A_1 wAgrkkgCTAATTAGbsvyykw
UP00625B_1 wAgdkbrCTAATTAGysryhgw
UP00625C_1 wtmkmgGcTAATTArCmmAwwaw
UP00625D_1 aAkrtsrCTAATTAGcgrthgw
UP00626A_1 wtmcryrYTAATTARkrrwgrg
UP00626C_1 tmmmamvTTAATTAAkwrtmtg
Publications: Ades S.E, Sauer R.T. Differential DNA-binding specificity of the engrailed homeodomain: the role of residue 50. Biochemistry 33:9187-94 (1994). [Pubmed]

Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.