DNA Binding Site
| Accessions: | AAGATCAA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | AAGATCAA |
| Type: | Heterodimer |
| Binding TFs: | UP00058A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00607A (Zinc finger, C4 type (two domains)) UP00607C (Zinc finger, C4 type (two domains)) UP00607E (Zinc finger, C4 type (two domains)) |
| Binding Motifs: | UP00058A_1 twwasATCAAAGgrwww UP00058A_2 rgssgaawawaaaww UP00607A_1 kmwdwycAAAGATCAagmktad UP00607C_1 mwywkrwTgATmtywamahwrka UP00607E_1 kmwktycAAAGATCAmgaktad |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.