DNA Binding Site
| Accessions: | CCAATTAC (UniPROBE 20160601) |
| Organisms: | Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CCAATTAC |
| Type: | Heterodimer |
| Binding TFs: | UP00584C (Homeobox domain) UP00584E (Homeobox domain) UP00584F (Homeobox domain) UP00609B (Homeobox domain, 'Paired box' domain, Homeobox KN domain) UP00609D (Homeobox domain, 'Paired box' domain, Homeobox KN domain) UP00609E (Homeobox domain, 'Paired box' domain, Homeobox KN domain) UP00609H (Homeobox domain, 'Paired box' domain, Homeobox KN domain) UP00614A (Homeobox domain) UP00614B (Homeobox domain) UP00614E (Homeobox domain) UP00624A (Homeobox domain) |
| Binding Motifs: | UP00584C_2 kavwsrsCyAATTrGyysmrka UP00584E_1 tkacggwtTAATTAatywtckk UP00584F_2 mAkrdyrCyAATTrGckrwtgm UP00609B_1 kawmktTAATCGATTAmyrrad UP00609D_1 katckwTAATCGATTAmyrsak UP00609E_1 kawmktTAATCGATTActrgad UP00609H_1 kawmktTAATCGATTAcyksad UP00614A_1 tkcrwkrstrATyagyaaawwaa UP00614B_1 wsvgakssTAATTAgsmawwwmw UP00614E_1 wbmrwkgvtrATyakcmwwwwmw UP00624A_1 wwmdwkgbTAATTAkcmawwawa |
| Publications: | Barrera LA, Vedenko A, Kurland JV, Rogers JM, Gisselbrecht SS, Rossin EJ, Woodard J, Mariani L, Kock KH, Inukai S, Siggers T, Shokri L, Gordân R, Sahni N, Cotsapas C, Hao T, Yi S, Kellis M, Daly MJ, Vidal M, Hill DE, Bulyk ML. Survey of variation in human transcription factors reveals prevalent DNA binding changes. Science 351:1450-4 (2016). [Pubmed] |
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