DNA Binding Site

Accessions: ybdO (DBTBS 1.0)
Names: ybdO
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 55
Sequence: tttgaggtTAATatatacattatattcGCCGATAAaaaagaataagagagaatac
Binding TFs: SigD (Sigma-70 region 3, Sigma-70 region 2 , Sigma-70, region 4)
Binding Motifs: SigD_1 TwAA
SigD_2 GCCGATAT
Publications: Serizawa M, Yamamoto H, Yamaguchi H, Fujita Y, Kobayashi K, Ogasawara N, Sekiguchi J. Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses. Gene 329:125-36 (2004). [Pubmed]

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