DNA Binding Site
| Accessions: | TCGATTAA (UniPROBE 20160601) |
| Organisms: | Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | TCGATTAA |
| Type: | Heterodimer |
| Binding TFs: | UP00609A (Homeobox domain, 'Paired box' domain, Homeobox KN domain) UP00609B (Homeobox domain, 'Paired box' domain, Homeobox KN domain) UP00609D (Homeobox domain, 'Paired box' domain, Homeobox KN domain) UP00609G (Homeobox domain, 'Paired box' domain, Homeobox KN domain) UP00609H (Homeobox domain, 'Paired box' domain, Homeobox KN domain) UP00613B (Homeobox domain, Homeobox KN domain) |
| Binding Motifs: | UP00609A_1 ctmwrkTAATCGATTAdckwtc UP00609B_1 kawmktTAATCGATTAmyrrad UP00609D_1 katckwTAATCGATTAmyrsak UP00609G_1 kawmkyTAATCGATTAmyrkmd UP00609H_1 kawmktTAATCGATTAcyksad UP00613B_2 ykwmrwctTAATTAaratysrr |
| Publications: | Barrera LA, Vedenko A, Kurland JV, Rogers JM, Gisselbrecht SS, Rossin EJ, Woodard J, Mariani L, Kock KH, Inukai S, Siggers T, Shokri L, Gordân R, Sahni N, Cotsapas C, Hao T, Yi S, Kellis M, Daly MJ, Vidal M, Hill DE, Bulyk ML. Survey of variation in human transcription factors reveals prevalent DNA binding changes. Science 351:1450-4 (2016). [Pubmed] |
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