DNA Binding Site
| Accessions: | TAATTGCA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | TAATTGCA |
| Type: | Heterodimer |
| Binding TFs: | UP00263A (Homeobox domain) UP00104A (Homeobox domain) UP00155A (Homeobox domain) UP00168A (Homeobox domain) UP00171A (Homeobox domain) UP00230A (Homeobox domain) UP00259A (Homeobox domain) UP00157A (Homeobox domain) UP00603A (Homeobox domain) UP00603B (Homeobox domain) |
| Binding Motifs: | UP00259A_1 wwtksgTAATTACsdy UP00104A_1 msvAGCAATTAAwgvwt UP00155A_1 acaAgCAATTAAwgvrT UP00157A_1 asaAgCAATTAAwrrat UP00168A_1 taadTAATTAATrgctw UP00171A_1 mamAAcyAATTAAktw UP00230A_1 ssrgyAATTrsykmts UP00263A_1 wsykGyAATTAAtarw UP00603A_2 bwyraaaacYAATTAaywhwmby UP00603B_1 wtwtrtgyAATTAwttaaktysw |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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