DNA Binding Site

Accessions: 6jgx_C (3D-footprint 20231221), 6jyw_C (3D-footprint 20231221)
Organisms: Pseudomonas putida
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 21
Sequence: ACCCTATAGTGGCTACAGGGT
Type: Heterodimer
Binding TFs: 6jgx_B (MerR family regulatory protein, MerR, DNA binding, MerR HTH family regulatory protein)
6jyw_A (MerR family regulatory protein, MerR, DNA binding, MerR HTH family regulatory protein)
6jyw_B (MerR family regulatory protein, MerR, DNA binding, MerR HTH family regulatory protein)
Binding Motifs: 6jgx_AB CncTnnnGCnACnanAgnG
6jgx_B cncTntnGT
6jyw_A CnCTnnnGT
6jyw_AB CncTnnnGTnGCnnnAgnG
Publications: Liu X, Hu Q, Yang J, Huang S, Wei T, Chen W, He Y, Wang D, Liu Z, Wang K, Gan J, Chen H. Selective cadmium regulation mediated by a cooperative binding mechanism in CadR. Proc Natl Acad Sci U S A 116:20398-20403 (2019). [Pubmed]

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