DNA Binding Site
| Accessions: | ACACCTGG (UniPROBE 20160601), MA2295.1.7 (JASPAR 2024), UN0808.1.16 (JASPAR 2024) |
| Organisms: | Mus musculus, Caenorhabditis elegans, Drosophila melanogaster, Homo sapiens |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | ACACCTGG |
| Type: | Heterodimer |
| Binding TFs: | P17542 (Helix-loop-helix DNA-binding domain) UP00046A (Helix-loop-helix DNA-binding domain) UP00358A (Helix-loop-helix DNA-binding domain) UP00384A (Helix-loop-helix DNA-binding domain) P10083 P17542 |
| Binding Motifs: | UP00046A_1 atcmvCAGGTGcraamw UP00358A_1 wAyyAwATwTrgmm UP00046A_2 arrgcCAGATGkyyssg UP00358A_2 / UP00384A_3 yvsamCACCTGTTmcrg MA2295.1 gCAGCTGc UN0808.1 GCACCTGg |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] Nitta KR, Jolma A, Yin Y, Morgunova E, Kivioja T, Akhtar J, Hens K, Toivonen J, Deplancke B, Furlong EE, Taipale J. Conservation of transcription factor binding specificities across 600 million years of bilateria evolution. Elife : (2015). [Pubmed] |
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