DNA Binding Site

						

			
Accessions: CTCATTAA (UniPROBE 20160601)

			
Organisms: Mus musculus, Drosophila melanogaster, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: CTCATTAA
Type: Heterodimer
Binding TFs: UP00063A / UP00391A (Homeobox domain)
UP00105A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00106A (Homeobox domain)
UP00118A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00124A (Homeobox domain)
UP00128A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00129A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00137A (Homeobox domain)
UP00158A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00179A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00189A (Homeobox domain)
UP00191A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00200A (Homeobox domain)
UP00215A (Homeobox domain)
UP00225A (Homeobox domain)
UP00238A (Homeobox domain)
UP00252A (Homeobox domain)
UP00254A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00146A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00506A (Homeobox domain)
UP00617A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00617D (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00618A (Homeobox domain, Pou domain - N-terminal to homeobox domain)
UP00623A (Homeobox domain)
UP00623B (Homeobox domain)
Binding Motifs: UP00200A_2 rrtwATTAATKAykyc
UP00063A_1 tkgagbTAATTAry
UP00105A_1 rmttAATTAATTAadtc
UP00106A_1 kwvcryTAATTArkrc
UP00118A_1 wrtwATTAATkArkyc
UP00124A_1 marsTAATTAgywcAt
UP00128A_1 swtAaTTAATTArkkyr
UP00129A_1 rmyTAATTAATTAaktm
UP00137A_1 wravcTMATKAgykrrw
UP00146A_1 vwmswTAATKAGstkgm
UP00158A_1 rrwtAATTAATTAwgtc
UP00179A_1 ttkTATGCWAATkara
UP00189A_1 amgkTAATTAscwmar
UP00191A_1 ywkTATGCWAATkara
UP00200A_1 gmwwATTAATTAmyybg
UP00215A_1 asgtTAATTAvcyyag
UP00225A_1 cmaTAATTrATTAym
UP00238A_1 gawwwTTAATKAmtkyk
UP00252A_1 cgmrtTAATTAatwayt
UP00254A_1 dtdwrwTAATTArktw
UP00391A_1 tygmrbTAATTAry
UP00063A_2 aarawCbATTArsr
UP00146A_2 rhasATAATGAGstkkc
UP00506A_1 amkwgvryyAATTrrcksacyw
UP00617A_1 TawArtTTATTAATAhttwwab
UP00617D_1 thravkTTATTAATAwtktmak
UP00618A_1 wwvrybagcTAATTArkgywmt
UP00623A_1 tyatcggsTAATTAscycAktmr
UP00623A_2 wtakcggsYAATTRscymAdwar
UP00623B_1 whmtrkGsTAATTAsCccAtwaa
UP00623B_2 whatskGyTAATTAsCycAdtar
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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