DNA Binding Site

Accessions: rocD_3 (DBTBS 1.0)
Names: rocD_3
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 21
Sequence: ataTCAGAATgTTTTTGCacc
Binding TFs: RocR (Sigma-54 interaction domain, Bacterial regulatory protein, Fis family, AAA domain (dynein-related subfamily), PAS fold, PAS domain)
Binding Motifs: RocR GCAAAAkmATTyTGC
Publications: Gardan R, Rapoport G, Débarbouillé M. Expression of the rocDEF operon involved in arginine catabolism in Bacillus subtilis. Journal of molecular biology 249:843-56 (1995). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.