DNA Binding Site

						

			
Accessions: CCCCCCCG (UniPROBE 20160601)

			
Organisms: Mus musculus, Drosophila melanogaster, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: CCCCCCCG
Type: Heterodimer
Binding TFs: UP00022A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00057A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00537A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00587C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00599B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
UP00627A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Motifs: UP00022A_1 ycyccCCCCCCmmwys
UP00057A_1 bmCCCCCgGGGGggt
UP00022A_2 rrrtwCCCCCCggrrry
UP00057A_2 ycdCvCAGCAkGara
UP00537A_1 raagccmCCskGGGGGGcyrays
UP00537A_2 kymwtvyAGGgGGTmswkdtga
UP00587C_1 skrgcwrGGGGGGGsrGdyarkk
UP00599B_1 rtsmcsmmCCCCCCccacgysg
UP00627A_1 aatawwmCtCCCCCrCaytyvam
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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