DNA Binding Site

Accessions: CTCACACC (UniPROBE 20160601)
Organisms: Patiria miniata, Strongylocentrotus purpuratus
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: CTCACACC
Type: Heterodimer
Binding TFs: UP00501A / UP00501B (T-box)
UP00502A / UP00502B (T-box)
Binding Motifs: UP00501A_1 / UP00501A_2 yskctrrAGGTGTGAAywwamst
UP00501A_3 / UP00501A_4 mrwmhsCsAGGTGACAtawstsv
UP00501B_1 / UP00501B_2 smsrsmrAGGTGYGAAmtwrdw
UP00501B_3 / UP00501B_4 whyccgkAGGTGwygsymshcs
UP00502A_1 ycgswvdAGGTGTGAAydrkwch
UP00502B_1 smkvssgAGGTGyGAAmyrsdy
Publications: Cheatle Jarvela AM, Brubaker L, Vedenko A, Gupta A, Armitage BA, Bulyk ML, Hinman VF. Modular evolution of DNA-binding preference of a Tbrain transcription factor provides a mechanism for modifying gene regulatory networks. Mol Biol Evol 31:2672-88 (2014). [Pubmed]

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