DNA Binding Site

Accessions: 6fix_C (3D-footprint 20231221)
Organisms: Pseudomonas putida
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 30
Sequence: AAATTAACGAATAACGTTAAGCATTCAGCT
Type: Heterodimer
Binding TFs: 6fix_D (Helix-turn-helix)
6fix_E (Helix-turn-helix)
Binding Motifs: 6fix_D tTAa
6fix_ABDE ACnnnTaAnnTTAAnnnTT
Publications: Talavera A, Tamman H, Ainelo A, Konijnenberg A, Hadži S, Sobott F, Garcia-Pino A, Hõrak R, Loris R. A dual role in regulation and toxicity for the disordered N-terminus of the toxin GraT. Nat Commun 10:972 (2019). [Pubmed]

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