DNA Binding Site
| Accessions: | MA0157.4.9 (JASPAR 2024), MA0852.3.6 (JASPAR 2024), MA1606.2.20 (JASPAR 2024), MA2117.1.7 (JASPAR 2024), UN0436.2.19 (JASPAR 2024), UN0802.1.19 (JASPAR 2024), UN0802.1.9 (JASPAR 2024) |
| Organisms: | Mus musculus, Homo sapiens, Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 7 |
| Sequence: | CTAAACA |
| Type: | Heterodimer |
| Binding TFs: | Q9WVH4 (Fork head domain) Q61080 (Fork head domain) P85037 (Fork head domain, FHA domain) Q86P48 Q8IVH2 (Fork head domain) P85037 Q08050 Q61080 Q86P48 Q8IVH2 Q9WVH4 |
| Binding Motifs: | MA0157.4 GTAAACA MA0852.3 GTAAACA MA1606.2 rTAAACA MA2117.1 GTAAACA UN0436.2 GTAAACA UN0802.1 GTAAACA |
| Publications: | Portales-Casamar E, Kirov S, Lim J, Lithwick S, Swanson M.I, Ticoll A, Snoddy J, Wasserman W.W. PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation. Genome biology 8:R207 (2007). [Pubmed] Tsai K.L, Huang C.Y, Chang C.H, Sun Y.J, Chuang W.J, Hsiao C.D. Crystal structure of the human FOXK1a-DNA complex and its implications on the diverse binding specificity of winged helix/forkhead proteins. The Journal of biological chemistry 281:17400-9 (2006). [Pubmed] Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] Li S, Weidenfeld J, Morrisey EE. Transcriptional and DNA binding activity of the Foxp1/2/4 family is modulated by heterotypic and homotypic protein interactions. Mol Cell Biol 24:809-22 (2004). [Pubmed] |
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