DNA Binding Site

Accessions: GTACTTAA (UniPROBE 20160601)
Organisms: Mus musculus, Caenorhabditis elegans, Drosophila melanogaster, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: GTACTTAA
Type: Heterodimer
Binding TFs: UP00017A / UP00389A (Homeobox domain)
UP00147A (Homeobox domain)
UP00190A (Homeobox domain)
UP00228A (Homeobox domain)
UP00396A (Homeobox domain)
UP00504A (Homeobox domain)
UP00511A (Homeobox domain)
UP00604A (Homeobox domain)
UP00604C (Homeobox domain)
Binding Motifs: UP00017A_1 mwwarCCACTTAAsgab
UP00147A_1 trAkCCACTTrAvwtt
UP00190A_1 yyTtAAGYRCTTaatg
UP00228A_1 mwtawSCACTTAavmay
UP00389A_1 twywAAGTACTTAaaws
UP00396A_1 / UP00396A_2 tsdywrrCCACTTsAmawtwmk
UP00017A_2 vmdsvrrGTACyykgma
UP00504A_1 GrayyrrCCACTTAryyytgaw
UP00511A_1 aagrcwtawCCACTTAwrwwymA
UP00604A_1 mwawtwwAAGYRCTTAAawyyw
UP00604C_1 mwawtwwAAGYRCTTAAawyyw
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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