DNA Binding Site

						

			
Accessions: ATTAATTG (UniPROBE 20160601)

			
Organisms: Mus musculus, Saccharomyces cerevisiae, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: ATTAATTG
Type: Heterodimer
Binding TFs: UP00224A (Homeobox domain, 'Paired box' domain)
UP00263A (Homeobox domain)
UP00078A (ARID/BRIGHT DNA binding domain)
UP00104A (Homeobox domain)
UP00108A (Homeobox domain)
UP00113A (Homeobox domain)
UP00138A (Homeobox domain)
UP00145A (Homeobox domain)
UP00151A (Homeobox domain)
UP00155A (Homeobox domain)
UP00156A (Homeobox domain)
UP00163A (Homeobox domain, Engrailed homeobox C-terminal signature domain)
UP00167A (Homeobox domain, Engrailed homeobox C-terminal signature domain)
UP00175A (Homeobox domain, Homeobox KN domain)
UP00178A (Homeobox domain)
UP00182A (Homeobox domain)
UP00200A (Homeobox domain)
UP00206A (Homeobox domain)
UP00212A (Homeobox domain, Homeobox KN domain)
UP00218A (Homeobox domain)
UP00234A (Homeobox domain)
UP00238A (Homeobox domain)
UP00242A (Homeobox domain)
UP00244A (Homeobox domain)
UP00248A (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
UP00255A (Homeobox domain)
UP00260A (Homeobox domain)
UP00262A (Homeobox domain, Homeobox KN domain)
UP00274A (Homeobox domain)
UP00157A (Homeobox domain)
UP00164A (Homeobox domain)
UP00584E (Homeobox domain)
UP00595A (Homeobox domain)
UP00603A (Homeobox domain)
UP00603B (Homeobox domain)
UP00603C (Homeobox domain)
UP00609A (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
UP00610C (Homeobox domain, 'Paired box' domain)
UP00610D (Homeobox domain, 'Paired box' domain)
UP00611D (Homeobox domain, 'Paired box' domain)
UP00619B (Homeobox domain, Homeobox KN domain)
UP00626C (Homeobox domain)
Binding Motifs: UP00200A_2 rrtwATTAATKAykyc
UP00255A_1 twrttaATTAwtaawwr
UP00078A_1 sgktTTAATTAAwmtwy
UP00104A_1 msvAGCAATTAAwgvwt
UP00108A_1 wawayTAATTAryTsav
UP00113A_1 CgmrTTAATTAAywawm
UP00138A_1 vmrgyAATTrsytsAd
UP00145A_1 aamAAcCAATTAAswh
UP00151A_1 taakYAATTRrtkrtr
UP00155A_1 acaAgCAATTAAwgvrT
UP00156A_1 vmagACyAATTAgykht
UP00157A_1 asaAgCAATTAAwrrat
UP00163A_1 wgmmyYAATTRrygrah
UP00164A_1 sgmrtTAATTAatwagc
UP00167A_1 gsvAAcTAATTArkgc
UP00175A_1 csyayTAATTArtymcy
UP00178A_1 cgsryyAATTrrkways
UP00182A_1 amgkTAATTACcymak
UP00200A_1 gmwwATTAATTAmyybg
UP00206A_1 stakTAATTAmtkshr
UP00212A_1 sraaTTAATTAAwwamy
UP00218A_1 bktmAtTAATkAakwm
UP00224A_1 TrayTAATTArtkvac
UP00234A_1 krmwayTAATTAatwm
UP00238A_1 gawwwTTAATKAmtkyk
UP00242A_1 twkrrgTAATTAhykt
UP00244A_1 kwatyAATTAATaayww
UP00248A_1 mgwmyTAATTArkwmda
UP00260A_1 yrarkTAATTAmtwamw
UP00262A_1 mgwaTTAATTAAwwahk
UP00263A_1 wsykGyAATTAAtarw
UP00274A_1 ttsmmaYTAATTARwwwmks
UP00078A_2 hmmvrtATcrdrtyk
UP00164A_2 kkmkTAATTAmkggmm
UP00584E_1 tkacggwtTAATTAatywtckk
UP00595A_2 ttmyywrrTAATTAyyawtwwA
UP00603A_1 mtwyaaaAAcCAATTAacwmray
UP00603A_2 bwyraaaacYAATTAaywhwmby
UP00603B_1 wtwtrtgyAATTAwttaaktysw
UP00603B_2 ssgksgcAkYAATTAskmmymya
UP00603C_2 ydmmayrCyAATTrGtmwtyrs
UP00609A_1 ctmwrkTAATCGATTAdckwtc
UP00610C_2 aakwgswyTAATTArygsacbw
UP00610D_2 aakwgshyTAATTArygsackw
UP00611D_1 whwydkgkTAATTAkcawawwaw
UP00619B_1 rwrtdTwwtyyAATTArkwywaw
UP00626C_1 tmmmamvTTAATTAAkwrtmtg
			
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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