DNA Binding Site
| Accessions: | CCCCCCGC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Drosophila melanogaster, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CCCCCCGC |
| Type: | Heterodimer |
| Binding TFs: | UP00006A (Zinc finger, C2H2 type, Zinc-finger double-stranded RNA-binding, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00024A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00057A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00102A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00537A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00587D (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00599B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627B (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Motifs: | UP00006A_1 smCCCCCgGGGGggt UP00024A_1 ywwsGACCCCCCayrd UP00057A_1 bmCCCCCgGGGGggt UP00102A_1 smCCCCcgGGGGGg UP00006A_2 kwdCaCAGCAkGmsa UP00024A_2 wwTAttAwtAAAga UP00057A_2 ycdCvCAGCAkGara UP00102A_2 ymdCrCAGCAkGmrw UP00537A_1 raagccmCCskGGGGGGcyrays UP00537A_2 kymwtvyAGGgGGTmswkdtga UP00587D_1 ktstwmyCCCMCGCAhtwtyaw UP00599B_1 rtsmcsmmCCCCCCccacgysg UP00627A_1 aatawwmCtCCCCCrCaytyvam UP00627B_1 TwtTwawATAmAwATAAwwTwkG |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.