DNA Binding Site
| Accessions: | TATAAAAA (UniPROBE 20160601), MA1295.2.6 (JASPAR 2024) |
| Organisms: | Plasmodium falciparum, Homo sapiens, Arabidopsis thaliana |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | TATAAAAA |
| Type: | Heterodimer |
| Binding TFs: | Q93WV0 (WRKY DNA -binding domain) UP00433A (AP2 domain) UP00589B (Fork head domain) UP00597E (Homeobox domain) UP00597F (Homeobox domain) Q93WV0 |
| Binding Motifs: | UP00433A_1 yygtrwyAGCTAGCTvrckmtg UP00589B_1 rawscwTAwrTAAACAaTawka UP00597E_1 kyaaatksGkATAAAwwtdtwht UP00597F_1 tdccakmGTAyAAAAkwhawwr UP00597F_2 yksaakmGTAYAAAAtwmawwv MA1295.2 CKTTGACy |
| Publications: | Campbell TL, De Silva EK, Olszewski KL, Elemento O, Llinás M. Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite. PLoS Pathog : (2010). [Pubmed] Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.