DNA Binding Site
| Accessions: | ACAAAGGA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | ACAAAGGA |
| Type: | Heterodimer |
| Binding TFs: | UP00030A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00062A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00069A (HMG (high mobility group) box, Domain of unknown function (DUF1898), SOX transcription factor) UP00401A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) |
| Binding Motifs: | UP00069A_7 khtaATTATAATwwdm UP00069A_11 mwaAACAATTrAwhw UP00030A_1 / UP00069A_1 wkwarAACAAWGraywa UP00062A_1 akdarAACAAAGracww UP00069A_13 twyhATTGTTbtmamw UP00069A_15 wwtyaATTcAwTamdk UP00069A_9 wrkwgAACAATwrrtwt UP00069A_5 wtwrgAACAATwwwtw UP00069A_3 twATTGTTcthawh UP00401A_1 tadAACAAwGrvrw UP00069A_8 ykyasACAATrgmks UP00069A_12 gwycacATTCAtryrat UP00030A_2 / UP00069A_2 arAATTGTywkrrw UP00062A_2 grwarAATTGTtasrra UP00069A_14 gkrsyraATtyrwdhm UP00069A_10 btramTGwmATtysr UP00069A_16 myaTaATTGTTakys UP00069A_4 mmwyasACAAAGrawt UP00069A_6 rtrytGGgtGGGwawwt |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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