DNA Binding Site

Accessions: ECK120015560 (RegulonDB 7.5)
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 38
Sequence: acctttaatcTGATTAGTTAACCAATTCtgtgttgcac
Binding TFs: ECK120006922 (Bacterial regulatory proteins, gntR family, Transcriptional regulator, FCD domain)
Binding Motifs: UxuR wdTRRTTRACCARKT
Publications: Suvorova IA., Tutukina MN., Ravcheev DA., Rodionov DA., Ozoline ON., Gelfand MS. Comparative genomic analysis of the hexuronate metabolism genes and their regulation in gamma-proteobacteria. J Bacteriol (2011). [Pubmed]

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