DNA Binding Site
| Accessions: | GAAAAAAA (UniPROBE 20160601), MA0479.2.6 (JASPAR 2024) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | GAAAAAAA |
| Type: | Heterodimer |
| Binding TFs: | UP00316A (bZIP transcription factor) O75593 (Fork head domain) UP00077A (SRF-type transcription factor (DNA-binding and dimerisation domain)) UP00342A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00589D (Fork head domain) O75593 |
| Binding Motifs: | UP00077A_1 wwCCwwATwwGGwa UP00316A_1 sgkywgmTTAyGTaAkcrrc UP00342A_1 wywrdrAAAAwTTTTyywykg UP00077A_2 stwwaaAaAAAammtwh UP00589D_1 rwwygyrTwwAaTAwAwrdAwr MA0479.2 AATMCACA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] Zhou S, Zawel L, Lengauer C, Kinzler K.W, Vogelstein B. Characterization of human FAST-1, a TGF beta and activin signal transducer. Molecular cell 2:121-7 (1998). [Pubmed] |
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