DNA Binding Site
| Accessions: | CCCACTTA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Drosophila melanogaster, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CCCACTTA |
| Type: | Heterodimer |
| Binding TFs: | UP00017A / UP00389A (Homeobox domain) UP00107A (Homeobox domain) UP00147A (Homeobox domain) UP00165A (Homeobox domain) UP00190A (Homeobox domain) UP00228A (Homeobox domain) UP00249A (Homeobox domain) UP00504A (Homeobox domain) UP00604A (Homeobox domain) UP00604B (Homeobox domain) |
| Binding Motifs: | UP00017A_1 mwwarCCACTTAAsgab UP00107A_1 waarCCACTTrAmwty UP00147A_1 trAkCCACTTrAvwtt UP00165A_1 yaAgCCACTTgAmhtt UP00190A_1 yyTtAAGYRCTTaatg UP00228A_1 mwtawSCACTTAavmay UP00249A_1 hrakCCACTTrAawty UP00389A_1 twywAAGTACTTAaaws UP00017A_2 vmdsvrrGTACyykgma UP00504A_1 GrayyrrCCACTTAryyytgaw UP00604A_1 mwawtwwAAGYRCTTAAawyyw UP00604B_1 twykawrCCACTTrAmwttrsm |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.