DNA Binding Site

Accessions: 1gxp_D (3D-footprint 20231221), 1gxp_H (3D-footprint 20231221)
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 22
Sequence: CCGTGACAACTTTATGACAGCT
Type: Heterodimer
Binding TFs: 1gxp_A (Transcriptional regulatory protein, C terminal)
1gxp_B (Transcriptional regulatory protein, C terminal)
1gxp_F (Transcriptional regulatory protein, C terminal)
Binding Motifs: 1gxp_A CTtTnngACA
1gxp_AB CCntGACAnCTTTnnGACA
1gxp_EF CnnGACAnCTTTnTGACA
Publications: Blanco AG., Sola M., Gomis-Ruth FX., Coll M. Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator. Structure. 10(5):701-13 (2002). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.